CDS

Accession Number TCMCG057C57686
gbkey CDS
Protein Id XP_018463898.1
Location complement(join(3381..3472,3568..3687,3765..3901,4001..4119,4210..4392,4485..4678,4767..4888,4968..5125,5217..5339))
Gene LOC108835093
GeneID 108835093
Organism Raphanus sativus

Protein

Length 415aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018608396.1
Definition PREDICTED: lariat debranching enzyme [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Lariat debranching enzyme, C-terminal domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K18328        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0008419        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016891        [VIEW IN EMBL-EBI]
GO:0016893        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGATTGCTATTGAAGGGTGTATGCACGGAGACCTTGAAAATGTGTACAAGACCATTCAACATCACGAACAGATTCACAACACTAAAGTCGATCTCCTCCTCTGCTGCGGCGATTTCCAGGCTGTGAGAAATGAGAAAGACATGGATAGCCTTAGCGTACCTATAAAATACAGAGAGATGAAGTCCTTCTGGAAGTACTACTCCGGCCAAGAAGTTGCCCCTGTTCCCACTATCTTCATCGGTGGGAATCACGAGGCTTCCAACTACTTGTGGGAACTGTATTATGGGGGTTGGGCTGCCACCAACATCTACTTTCTAGGTTATGCAGGGGTTGTCAAGTTTGGTAATCTCCGAATTGGAGGCCTTTCTGGTATTTACAAGGGGAGAGATTACCGTTTAGGACACTTTGAGCGGCCGCCATATAACAATAGCACAATCAAATCGGTGTATCATGTTCGTGAGTATGATGTCCATAAGCTGATGCAACTCGAAGAGCCGCTTGATATATTCCTCTCACACGACTGGCCTGTTGGAATCACTGATTATGGAGACTCGAGAACGCTTATTCAGCAGAAACCATACTTCCAGGAAGAGATCGAGGCGAAAACTCTTGGAAGCAAACCAGCGGCTCAACTGCTAGAGAAACTGAAGCCTCGGTATTGGTTTTCAGCTCACTTACACTGCAAATTCGCTGCTTCTGTTCAACATGGCAACGATGGCTCAGTGACAAAGTTTCTTGCCTTGGATAAATGCGGTCCAGGGAAAAAGTTTCTTCAGATCATTGATATAGAATCAGAGCCTGGACCTTTTGAAGTTCTATACGATGAAGAGTGGCTAGCAATAACACGAAAGTTCAATTCTGTTTTCCCGCTAACACAGAGACCAGCGAGTTTCAGCTCTGCTGACATGGATATGCAAGAGAGCCGAGAGTGGGTGAGGAAGAAGCTAGAAGAAAGGCAATTTAAACCTTTCGAGTTTGTAAAGACGGCCCCTGCATATAACCCTTCACAGCGTATCTTTGATCCCATACCTGAGATCCCGCAGAATCCTCAGACACTGTCTTTGTTAGAGCTCCTTGGTCTTCCATATCTCCTTGATTCACCACCAGTAACAGGTGAAAGAACCACCATCCCTGCTTCACCGGCTCGAACAGATTTTCAAACTTATAGTGAAGAAATCCCTATTGATGATATTGATGAAGTTGAAGATATACCAGAAGCGAAAGGAGATAACTTACCACACTAA
Protein:  
MKIAIEGCMHGDLENVYKTIQHHEQIHNTKVDLLLCCGDFQAVRNEKDMDSLSVPIKYREMKSFWKYYSGQEVAPVPTIFIGGNHEASNYLWELYYGGWAATNIYFLGYAGVVKFGNLRIGGLSGIYKGRDYRLGHFERPPYNNSTIKSVYHVREYDVHKLMQLEEPLDIFLSHDWPVGITDYGDSRTLIQQKPYFQEEIEAKTLGSKPAAQLLEKLKPRYWFSAHLHCKFAASVQHGNDGSVTKFLALDKCGPGKKFLQIIDIESEPGPFEVLYDEEWLAITRKFNSVFPLTQRPASFSSADMDMQESREWVRKKLEERQFKPFEFVKTAPAYNPSQRIFDPIPEIPQNPQTLSLLELLGLPYLLDSPPVTGERTTIPASPARTDFQTYSEEIPIDDIDEVEDIPEAKGDNLPH